Publication Date
2020
Document Type
Dissertation/Thesis
First Advisor
Duvall, Melvin R.
Degree Name
M.S. (Master of Science)
Legacy Department
Department of Biological Sciences
Abstract
Climate change has been considered a key driver for adaptations in water usage efficiency (WUE) in plants. Perceptions persist that C4 photosynthesis is indicative of some level of WUE. Here, we examined the interaction and evolution of WUE within the grass family, Poaceae, as it pertains to photosynthetic pathway. Unique to this study is the magnitude of taxa sampled, presence of intrageneric sampling, and use of complete plastid genomes (plastomes) for phylogenomic analyses.
310 species were sampled, including 26 with newly sequenced plastomes, which were assembled de novo from next-generation sequencing data. Additional plastomes were downloaded from the National Center for Biotechnology Information (https://www.ncbi.nlm.nih.gov/), thereby increasing taxonomic and molecular sampling. Critical leaf water potentials were available in the literature for 88 taxa; key classifiers for the remaining taxa were obtained from the literature to infer WUE.
Phylogenetic analyses of complete plastomes were conducted with maximum likelihood (ML) and Bayesian inference methods. Character state transitions were determined using Mesquite software, and analyzed to determine the relationship between photosynthetic pathway and WUE using Pagel’s Correlation Method.
The ancestral condition of Poaceae was determined to be drought intolerant + C3. There was no correlation between C4 photosynthesis and increased WUE within C4 lineages. Analyses across Poaceae indicated that both variables (WUE and photosynthetic pathway) were significantly correlated, but WUE did not depend on photosynthetic pathway and vice versa. We found 66 occurrences of WUE state transitions and state reversals accounted for >70%; transitions became increasingly prevalent towards the branch tips.
Our analyses indicated that C4 photosynthesis, however correlative, is not a driver of increased WUE, but an attribute that likely arose as a result of tertiary evolutionary pressure(s). Multiple state transitions in WUE among lineages also suggests a degree of WUE plasticity.
Recommended Citation
Nissenbaum, Matthew P., "Dispelling The Mirage of C4-Driven Drought tolerance in Poaceae: A Phylogenomic Study" (2020). Graduate Research Theses & Dissertations. 7497.
https://huskiecommons.lib.niu.edu/allgraduate-thesesdissertations/7497
Extent
121 pages
Language
eng
Publisher
Northern Illinois University
Rights Statement
In Copyright
Rights Statement 2
NIU theses are protected by copyright. They may be viewed from Huskie Commons for any purpose, but reproduction or distribution in any format is prohibited without the written permission of the authors.
Media Type
Text
Included in
Developmental Biology Commons, Ecology and Evolutionary Biology Commons, Genetics Commons, Plant Sciences Commons