Calvo, Ana M.
M.S. (Master of Science)
Department of Biological Sciences
Ascomycota fungi are mostly saprophytic in nature, living off dead or decaying matter. However, a small subset of these fungi possess the ability to infect live hosts and cause disease while obtaining nutrients. Phytopathogenic Ascomycota are responsible for substantial economic losses each year, destroying valuable crops. Previous genomic studies have been conducted to annotate sequenced genes and proteins of these fungi with predicted functions, and those annotations are publicly accessible through online databases. Through these means, several genes have been identified to play a role in pathogenicity in some agriculturally relevant fungi. Through a bioinformatic analysis approach the present study provides further insights between the functional annotations of known phytopathogenic and non-phytopathogenic Ascomycota fungi, specifically by categorizing orthologous groups from phytopathogenic and non-phytopathogenic Ascomycota genomes and identifying trends using their respective protein functional annotations. This approach determined positive enrichment existing between categories revealing a prediction of what genetic characteristics make an Ascomycete phytopathogenic.
Peterson, Daniel Curtis, "Categorization of Orthologous Gene Clusters in 92 ascomycota Genomes Reveals Functions Important For Fungal Phytopathogenicity" (2020). Graduate Research Theses & Dissertations. 7541.
Northern Illinois University
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